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Alkylating Agents for Disinfection

Aug 17, 2025

Overview

This lecture covers alkylating agents used for disinfection and sterilization, focusing on formaldehyde, glutaraldehyde, and related compounds, including their uses, properties, and safety concerns.

Alkylating Agents: Mechanism and General Properties

  • Alkylating agents replace hydrogen atoms on molecules with alkyl groups, inactivating enzymes and damaging nucleic acids (DNA/RNA).
  • They are strong disinfectants/sterilants but are not suitable as antiseptics due to toxicity and carcinogenicity.
  • These chemicals can damage living tissue and are generally used only on inanimate surfaces or equipment.

Formaldehyde and Formalin

  • Formaldehyde is commonly used as an embalming fluid and laboratory specimen preservative.
  • A 37% aqueous solution of formaldehyde is called formalin.
  • Formalin can be used as both a liquid disinfectant and a gaseous disinfectant.
  • Formaldehyde is highly irritating and carcinogenic; not used on living tissues.

Glutaraldehyde

  • Glutaraldehyde is a more effective chemical sterilizing agent than formaldehyde, effective at 2% concentration.
  • Commonly sold under the brand name Cydex.
  • It is capable of sterilization, removing all living organisms from equipment and surfaces.

Ethylene Oxide

  • Ethylene oxide is a gaseous sterilant used for sterilizing packaged materials.
  • Historically used in sterilization chambers for bulk sterilization.
  • It is the main gaseous sterilant discussed in this context.

Ortho-Phthalaldehyde (OPA)

  • OPA is a newer compound replacing glutaraldehyde in modern formulations like Cydex.
  • OPA is more effective, especially against Mycobacterium tuberculosis, and is less irritating with a milder odor.

Key Terms & Definitions

  • Alkylating agent โ€” a chemical that transfers alkyl groups to molecules, disrupting their function.
  • Disinfectant โ€” a substance that eliminates most pathogens on inanimate surfaces.
  • Sterilant โ€” an agent that destroys all forms of microbial life.
  • Formaldehyde/Formalin โ€” a 37% liquid solution of formaldehyde used for preservation and disinfection.
  • Glutaraldehyde โ€” a potent chemical sterilant, effective at 2% concentration.
  • Ethylene oxide โ€” a gaseous sterilant for packaged and heat-sensitive materials.
  • Ortho-phthalaldehyde (OPA) โ€” a newer, less irritating chemical sterilant replacing glutaraldehyde.

Action Items / Next Steps

  • Review the examples and uses of each alkylating agent discussed.
  • Be familiar with safety concerns and why these agents are not used as antiseptics.