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Amino Acid Transamination Overview

Nov 17, 2025

Overview

Lecture explains amino acid metabolism focusing on transamination in muscle, oxidative deamination in liver, energy and glucose production, and clinical relevance of ALT/AST.

Transamination: Concept and Mechanism

  • Definition: Transfer of an amine group from an amino acid to a keto acid.
  • Cofactor: Pyridoxal phosphate (PLP), derived from vitamin B6; forms a Schiff base (imine) with enzyme.
  • Enzyme class: Aminotransferases (transaminases); reactions are reversible.

Alanine + α-Ketoglutarate

  • Alanine donates its amine to α-ketoglutarate; oxygen swaps to alanine.
  • Products: Pyruvate (from alanine) and glutamate (from α-ketoglutarate).
  • Enzyme: Alanine aminotransferase (ALT; also called alanine aminotransferase/transaminase).

Aspartate + α-Ketoglutarate

  • Aspartate donates its amine to α-ketoglutarate; oxygen swaps to aspartate.
  • Products: Oxaloacetate (from aspartate) and glutamate (from α-ketoglutarate).
  • Enzyme: Aspartate aminotransferase (AST; aspartate aminotransferase/transaminase).

Transamination: Key Structural Notes

  • PLP mediates amine transfer via Schiff base linkage to enzyme active-site lysine.
  • Swapped groups: Amine (from amino acid) and carbonyl oxygen (from keto acid).

Fate of Pyruvate in Muscle

  • Converts to lactate under anaerobic conditions via lactate dehydrogenase; generates NAD+ from NADH.
  • Converts to acetyl-CoA to enter TCA cycle; proceeds to electron transport chain for ATP production.

Cori Cycle and Gluconeogenesis

  • Lactate released to blood, taken by liver, converted to pyruvate (lactate dehydrogenase; NAD+ to NADH).
  • Pyruvate converted to glucose-6-phosphate, then to free glucose (glucose-6-phosphatase in liver).
  • Purpose: Supports gluconeogenesis and returns glucose to muscle.

Oxidative Deamination in Liver

  • Substrate: Glutamate transported from muscle/other tissues to liver.
  • Enzyme: Glutamate dehydrogenase.
  • Cofactors: Uses NADP+ to form NADPH; adds water in a two-step mechanism (presented as net step).
  • Products: α-Ketoglutarate regenerated and free ammonia (NH3), which is toxic.
  • Ammonia handling: NH3 + H+ → NH4+; enters mitochondria for urea cycle (detailed elsewhere).
  • Location: Mainly liver; can occur in other tissues less significantly.

Integration with TCA Cycle and Energy/Glucose Production

  • Transamination generates TCA intermediates: pyruvate, oxaloacetate, α-ketoglutarate.
  • Amino acids can feed at multiple TCA/transition points:
    • Tyrosine → fumarate.
    • Valine → succinyl-CoA.
    • Leucine → acetoacetate/acetyl-CoA (acetoacetyl-CoA/acetyl-CoA equivalent).
  • Significance:
    • ATP production through TCA cycle and oxidative phosphorylation.
    • Gluconeogenesis: OAA → malate (shuttle) → OAA → PEP (PEPCK) → glucose.

Reversibility and Network Flow

  • ALT and AST reactions are reversible.
  • Glutamate + pyruvate ↔ alanine + α-ketoglutarate.
  • Glutamate + oxaloacetate ↔ aspartate + α-ketoglutarate.
  • Many amino acids interconvert to TCA intermediates via transamination.

Clinical Relevance of Transaminases

  • Tissue distribution: Heart, skeletal muscle, liver.
  • Injury marker:
    • Elevated AST ± ALT: Suggests liver damage.
    • Elevated ALT (and creatine kinase, troponin): Suggests cardiac or skeletal muscle injury; may indicate myocardial infarction.

Structured Summary

Process/EnzymeSubstratesCofactorProductsLocationNotes/Significance
ALT (alanine aminotransferase)Alanine + α-ketoglutaratePLP (vitamin B6)Pyruvate + GlutamateMuscle, liver, heartReversible; forms pyruvate for ATP or lactate; clinical marker (ALT)
AST (aspartate aminotransferase)Aspartate + α-ketoglutaratePLP (vitamin B6)Oxaloacetate + GlutamateMuscle, liver, heartReversible; generates OAA for TCA/gluconeogenesis; clinical marker (AST)
Lactate dehydrogenasePyruvate + NADH—Lactate + NAD+Muscle; liver (reverse)Supports anaerobic glycolysis; Cori cycle in liver converts lactate → pyruvate
Glucose-6-phosphataseGlucose-6-phosphate—Glucose + PiLiverFinal step of hepatic gluconeogenesis; supplies blood glucose
Glutamate dehydrogenaseGlutamate + NADP+ + H2O—α-Ketoglutarate + NADPH + NH3Mainly liverOxidative deamination; generates toxic NH3 for urea cycle; produces NADPH
PEPCKOxaloacetate + GTP—PEP + GDP + CO2Cytosol (pathway context)Key gluconeogenic step from OAA to PEP

Key Terms & Definitions

  • Transamination: Transfer of an amine group from an amino acid to a keto acid.
  • Pyridoxal phosphate (PLP): Vitamin B6-derived cofactor; forms Schiff base with enzyme.
  • Schiff base (imine): Carbon-nitrogen double bond linking PLP to enzyme active site.
  • Oxidative deamination: Removal of an amine from glutamate, producing NH3 and α-ketoglutarate.
  • Cori cycle: Muscle-to-liver lactate shuttle for gluconeogenesis.
  • Gluconeogenesis: Glucose synthesis from non-carbohydrate sources (e.g., amino acids).
  • NADPH: Reducing agent used in fatty acid synthesis and free radical reactions.
  • α-Ketoglutarate: TCA intermediate; key keto acid in transamination.
  • Oxaloacetate (OAA): TCA intermediate; gluconeogenic precursor via PEPCK.

Action Items / Next Steps

  • Understand ALT/AST mechanisms, substrates, and reversibility.
  • Trace flows: alanine/aspartate to TCA intermediates and onward to ATP/glucose.
  • Review handling of ammonia via urea cycle (covered in subsequent lecture).
  • Relate elevated ALT/AST to tissue injury patterns in clinical scenarios.