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Centrifugation Basics and Applications

Jul 15, 2025

Overview

The lecture introduces the basic principles, setup, and common applications of centrifugation in biological research, including sample collection and particle separation.

Principles of Centrifugation

  • Centrifugation involves rotation around a single axis, generating outward rotational force.
  • The centrifugal force pushes materials to the end of the tube, aiding in separation or collection.
  • It is used in biology to collect samples or separate particles within a mixture.

Centrifuge Operation and Settings

  • Tabletop centrifuges have an "Open" button to access the sample compartments.
  • Main settings to control are time (duration of spin) and speed.
  • Speed can be set in RPM (revolutions per minute) or RCF (relative centrifugal force).
  • RPM counts how many complete circles the centrifuge makes per minute.
  • RCF standardizes force between different centrifuges by relating speed to gravity (g).

Balancing and Running a Centrifuge

  • Samples should be loaded in a balanced manner around the rotorโ€™s circle.
  • If using a single sample tube, balance it with another tube containing an equal volume of water.
  • Secure the lid tightly to prevent leaks before starting the run.

Applications: Sample Collection and Separation

  • Centrifugation collects dispersed samples at the tubeโ€™s bottom for small volumes.
  • For particle separation, centrifugation pellets heavier particles (like bacterial cells) at the tube bottom.
  • The remaining liquid (supernatant) can be carefully removed with a pipette, leaving the pellet undisturbed.

Key Terms & Definitions

  • Centrifugation โ€” Separation process using rotational force to separate components by density.
  • RPM (Revolutions Per Minute) โ€” Number of full spins the centrifuge rotor makes in a minute.
  • RCF (Relative Centrifugal Force) โ€” Centrifugal force relative to gravity, standardizes between machines.
  • Supernatant โ€” The clear liquid above the solid pellet after centrifugation.
  • Pellet โ€” The compacted solid particles collected at the tube's bottom after centrifugation.

Action Items / Next Steps

  • Practice loading and balancing samples in a tabletop centrifuge.
  • Review the settings and units (RPM vs RCF) before any experiment.
  • Ensure careful pipetting when removing supernatant to avoid disturbing pellets.