🔬

Understanding Mass Spectroscopy Processes

Jun 3, 2025

Mass Spectroscopy

Overview

  • Mass Spectroscopy: Analytical technique used to measure mass-to-charge ratio of ions.
  • Process:
    • Sample vaporized and ionized using an electron beam.
    • Fragments into radicals and cations; only positively charged ions reach the detector.

Graph Interpretation

  • Y-axis: Relative abundance of positively charged fragments.
  • X-axis: Mass-to-charge (m/z) ratio.
  • Fragment Analysis: Determine which fragments form and their corresponding m/z numbers.

Pentane Example

  • Identification of Fragments:
    • Methyl Cation: Possible fragment; corresponds to peak at m/z 15.
    • Peaks:
      • Base Peak (m/z 43): Highest relative abundance; stable fragment.
      • Parent Peak (m/z 72): Total molecular weight of pentane.

Fragmentation Details

  • Breaking Bonds:
    • C1-C2 Bond: Results in CH3 group and butyl group.
    • C2-C3 Bond: Produces ethyl and propyl fragments.

Fragment Weights

  • CH3: 15
  • CH2: 14
  • Methyl Cation (m/z 15): Methyl radical counterpart.
  • Ethyl Cation (m/z 29): Matches observed peak.
  • Propyl Cation (m/z 43): Corresponds to base peak.

Stability and Abundance

  • Stability Factors:
    • Base Peak: Propyl cation more stable due to easier bond breaking (C2-C3).
    • Stability Comparison: Methyl carbocation less stable than primary carbocation.

Rearrangement and Secondary Cation

  • Carbocation Rearrangement:
    • Propyl Cation: Can rearrange to more stable secondary carbocation via hydride shift.
    • Mass-to-Charge (m/z 43): Applies to both primary and secondary propyl cations.

Additional Peaks

  • Peak at m/z 41:
    • Formation: From propyl cation losing two hydrogen radicals.
    • Allylic Carbocation: Stabilized by resonance, leading to abundance.
    • Calculation: m/z 43 minus 2 equals m/z 41.

Understanding these principles allows identification of molecular structures using mass spectroscopy.