Teaching Biology with System Dynamics

Sep 6, 2024

Lecture Notes: System Dynamics in Biology Teaching

Introduction

  • Speaker: John Darko, a seasoned biology teacher.
  • Background:
    • 18 years teaching experience.
    • Courses taught: AP Biology, Anatomy & Physiology, Biology, Physics.
    • Education: BA in Sociology, Post Bachelor’s in Life Science Education, Master’s in Education and Curriculum.
    • Currently taking graduate courses in Biological Science.
    • Developed online System Dynamics models for biology/ecology exploration available at johndarko.com.

System Dynamics in Teaching

  • Approach to Teaching:
    • Use System Dynamics models in teaching.
    • Students engage mainly through simulations.
    • Encourage students to modify and build System Dynamics models.

Goals of Using System Dynamics

  1. Investigations: Allow students to explore models and conduct virtual experiments.
  2. Model Representation: Understanding models as representations of systems.
  3. Teaching Dynamic Systems: Understanding biological systems as dynamic systems.
  4. Scientific Experiments: Engage students in designing critical experiments.

Teaching Strategies

Using System Dynamics Models

  • Exploration: Students modify parameters in simulations (e.g., enzyme activity).
  • Model Interactions: Transition between different types of models (diagrams, equations).
  • Dynamic Systems Understanding: Capture the non-linear relationships in biology.

Example: Enzyme Model Simulation

  • Interface: Variables and sliders for manipulating experiments.
  • Statistics: Include randomness for calculating mean, standard deviation, etc.
  • Scientific Method: Teach scientific practices through simulations.

Student Engagement

  • Pre-Lab Questions: Guide students in setting up experiments.
  • Data Representation: Encourage graphing and re-representing data.

Teaching Behaviors and Experiments

Behavior Over Time Graphs

  • Graph Interpretation: Students predict outcomes using graphs.
  • Simulation Exercises: Explore cellular respiration using dynamic models.

Designing Controlled Experiments

  • Learning Objectives: Understand how to design experiments that answer specific questions.
  • Limitations: Teach students to focus on questions answerable by the model.

Advanced Experiment Design

  • Crucial Experiments: Design experiments that distinguish between competing models.
  • Example: Experiments on glucose transport in cell membranes.

Encouraging Creativity

  • Student Model Building:
    • Design models with negative feedback for self-regulation.
    • Encourage creativity alongside scientific accuracy.

Classroom Techniques

  • Group Work: Promote collaboration through roles (e.g., Navigator, Driver).
  • Feedback: Provide opportunities for students to identify model limitations.

Conclusion and Reflection

  • Student Learning: Focus on understanding over perfect modeling.
  • System Dynamics Application: Applicable across various biological and scientific contexts.

These notes cover all the essential details from John Darko's lecture on using System Dynamics to teach biology, providing students with a dynamic understanding of systems through interactive modeling and simulations.