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M.13.6 Understanding Metabolism and Biochemical Reactions

Apr 28, 2025

Overview of Biochemical Reactions in Metabolism

Key Types of Metabolic Reactions

  • Anabolic Reactions (Synthesis Reactions)
    • Build larger molecules from smaller ones (monomers).
    • Input energy to form chemical bonds.
  • Catabolic Reactions (Decomposition Reactions)
    • Break down chemical bonds using water (hydrolysis).
    • Release stored energy from chemical bonds.

Cellular Respiration

  • Breakdown of food material to capture energy as ATP.
  • Oxygen is used to repurpose energy.
  • Metabolic processes repurpose energy from nutrients to ATP.

ATP (Adenosine Triphosphate)

  • Energy currency of the cell.
  • Energy stored in high-energy phosphate bonds.
  • Enzymes facilitate ATP synthesis.
  • ATP is used for cellular work by transferring energy to new molecules.

Stages of Metabolism

  1. Ingestion and Digestion
    • Catabolic breakdown of carbohydrates, proteins, lipids.
    • Absorption and transportation to tissues.
  2. Cellular Processing
    • Synthesis of lipids, proteins, glycogen.
    • Manufacturing of ATP.

Methods of ATP Generation

  • Substrate-Level Phosphorylation
    • Direct transfer of a phosphate group to ADP.
    • Involves an enzyme and is inefficient.
  • Oxidative Phosphorylation
    • Energy from chemical bonds adds phosphate to ADP.
    • Very efficient, uses intermediates from glucose breakdown.

Energy and Electrons

  • Electrons have energy, can be potential or kinetic.
  • Chemical bonds represent potential energy.
  • Energy from bonds is used for chemical, transport, and mechanical work.

Energy Efficiency

  • 60% of energy is lost as heat during ATP breakdown.
  • ATP is efficient due to high-energy phosphate bonds.

First Law of Thermodynamics

  • Energy is not created or destroyed, only repurposed.
  • Energy conversion examples: photosynthesis, ATP synthesis.

Chemical Reactions

  • Exergonic Reactions: Release energy.
  • Endergonic Reactions: Require energy input.
  • Activation energy is needed to initiate reactions.
  • Enzymes lower activation energy, increasing reaction likelihood.

Coupling Reactions

  • Favorable exergonic reactions are coupled with unfavorable endergonic reactions.
  • Example: ATP breakdown (exergonic) with peptide bond formation (endergonic).