Basic Principles of Chemical Organization

Sep 3, 2024

Chemical Level of Organization

Matter and Mass

  • Matter: Anything with mass and occupies space.
    • States of matter: Solid, Liquid, Gas.
  • Mass: Quantity of matter, determines weight in Earth's gravity.
    • Mass = Amount of material in matter.
    • For course purposes, mass = weight.

States of Matter

  • Solid: Definite shape and volume.
  • Liquid: Definite volume, changeable shape.
  • Gas: Changeable shape and volume.
  • Water: Exists in all three states (ice, water, vapor).

Elements

  • Composed of elements, cannot be broken down by ordinary means.
  • Have unique physical (sensory, measurable) and chemical properties (bonding).
  • Major Elements in Human Body:
    • Oxygen (O), Carbon (C), Hydrogen (H), Nitrogen (N)
    • Lesser elements: Calcium (Ca), Phosphorus (P), Potassium (K), Sodium (Na), Chlorine (Cl), etc.
    • Trace elements: Zinc, Chromium, Manganese, etc.

Atomic Structure

  • Atoms: Smallest stable units of matter.
    • Composed of subatomic particles.
    • Nucleus: Protons (+), Neutrons (no charge)
    • Electrons: Orbit nucleus, negative charge.

Models of Atomic Structure

  • Planetary Model
  • Electron Cloud Model
    • Electron shells important for chemical reactions.

Molecules and Compounds

  • Molecules: Atoms interacting, larger structures.
  • Compounds: Atoms from different elements.
  • Atomic Number: Number of protons.
  • Mass Number: Protons + Neutrons.
  • Isotopes: Same protons, different neutrons.
    • Radioactive isotopes decay, used in research/medicine.

Chemical Bonds

  • Ionic Bonds: Transfer of electrons.
    • Form cations (+) and anions (-).
    • Example: Sodium Chloride (NaCl).
  • Covalent Bonds: Sharing of electrons.
    • Can be single, double, or triple bonds.
    • Polar vs. Nonpolar bonds (e.g., water is polar).

Chemical Reactions and Energy

  • Chemical Reactions: Making or breaking chemical bonds.
    • Metabolism: All reactions in the body.
  • Energy Types: Kinetic (motion), Potential (stored).
    • Energy can change forms but not created/destroyed.

Types of Reactions

  • Synthesis (Combination): Form larger molecules.
  • Decomposition: Break down molecules.
  • Exchange: Making and breaking bonds.
  • Enzymes: Catalysts, lower activation energy.

Organic vs. Inorganic Compounds

  • Organic Compounds: Contain carbon, covalent bonds.
    • Carbohydrates, proteins, lipids, nucleic acids.
  • Inorganic Compounds: Typically do not contain carbon.

Important Biological Molecules

  • Carbohydrates: Major fuel source, structural role.
    • Monosaccharides, Disaccharides, Polysaccharides.
  • Lipids: Insoluble in water, energy storage, cellular structure.
    • Fatty acids, Triglycerides, Phospholipids, Steroids.
  • Proteins: Composed of amino acids.
    • Levels of structure: Primary, Secondary, Tertiary, Quaternary.
  • Nucleic Acids: DNA and RNA, genetic material.
    • ATP as the energy currency of the cell.