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Understanding Stereochemistry and Configurations

Sep 8, 2024

Stereochemistry Lecture Notes

Introduction

  • Topic: Stereochemistry, R-S configuration assignment
  • Focus includes Fischer projections and various examples

Chiral Centers

  • Definition: A chiral center, or chiral carbon, is a carbon atom with four different groups attached.

R-S Configuration Assignment

  1. Con Ingall Pre-Log Process:

    • Rank the four groups by atomic number (highest to lowest).
    • Example: Bromine (highest), Chlorine, Carbon, Hydrogen (lowest).
    • Priority Assignment:
      • Group 1: Highest priority
      • Group 4: Lowest priority, must be in the back (hatch wedge)
    • Rotation and Configuration:
      • Clockwise rotation: R configuration
      • Counterclockwise rotation: S configuration
  2. Example Assignments:

    • Bromine: Group 1, Chlorine: Group 2, Methyl: Group 3, Hydrogen: Group 4
    • If counterclockwise with H in the back: S configuration
    • If clockwise: R configuration

Relationship Between Molecules

  • Enantiomers:
    • Mirror images, opposite R-S configurations
    • Example: One molecule S, the other R

Additional Practice Problems

  • Assign R-S configurations to various chiral centers
  • Example groups: Ethyl, Hydrogen, Bromine, Hydroxyl
  • Assign priorities and determine configurations using the same principles

Naming Stereoisomers

  1. Identify Chiral Centers
    • Assign R-S configuration
    • Count carbons in the parent chain
  2. Example:
    • Find bromine, chlorine groups
    • Assign configurations
    • Name using IUPAC system (e.g., S-2-bromo-butane)

Number of Stereoisomers

  • One chiral center: 2 possibilities (R or S)
  • Two chiral centers: 4 possibilities
  • General formula: (2^n) (where n = number of chiral centers)

Fischer Projections

  • Understanding Fischer Projections:
    • Horizontal lines: Groups in the front
    • Vertical lines: Groups in the back
  • Assign configurations similarly, reversing when H is in front

Advanced Problem Solving

  • Dealing with Complex Structures:
    • Identify chiral centers in compounds like cholesterol
    • Determine possible stereoisomers using (2^n)

Special Techniques

  • Assigning Configurations When H is Neither Front nor Back:
    • Use triangle and circle technique for visualization
    • Example provided: Assigning groups into a structured format for evaluation

These notes should serve as a comprehensive guide for understanding stereochemistry, R-S configurations, and practical application in problem-solving and nomenclature.