Oxidative Phosphorylation Overview

Jun 5, 2025

Overview

This lecture covers oxidative phosphorylation, detailing how electrons move through the electron transport chain, establish a proton gradient, and drive ATP synthesis in cells.

Electron Transport Chain (ETC)

  • The ETC is the final stage of aerobic respiration and uses oxygen as the final electron acceptor.
  • It consists of four protein complexes (I-IV) embedded in the inner mitochondrial membrane.
  • Electrons from NADH enter at complex I, which pumps four protons into the intermembrane space.
  • FADH₂ donates electrons directly to complex II, bypassing complex I and resulting in fewer protons pumped.
  • Ubiquinone (Q) shuttles electrons from complexes I and II to complex III.
  • Complex III transfers electrons to cytochrome c and pumps more protons across the membrane.
  • Complex IV receives electrons and reduces O₂ to H₂O, removing protons from the matrix, further contributing to the proton gradient.

Chemiosmosis and ATP Synthase

  • ETC activity creates a high concentration of protons (H⁺) in the intermembrane space, forming an electrochemical gradient.
  • Protons flow back into the mitochondrial matrix through ATP synthase, a membrane protein complex.
  • The flow of protons through ATP synthase drives the conversion of ADP and inorganic phosphate to ATP.
  • This process is called oxidative phosphorylation.

ATP Yield and Regulation

  • The total ATP yield from glucose catabolism varies by species and tissue type.
  • NADH-linked electrons produce more ATP than those from FADH₂ because of differences in proton pumping.
  • Some electron carriers and intermediates are used in anabolic processes, affecting ATP yield.
  • About 34% of glucose’s energy is captured as ATP; the rest is lost as heat.

Disruptions and Inhibitors

  • Uncouplers like dinitrophenol (DNP) make the membrane leaky to protons, dissipating the gradient and reducing ATP production.
  • Cyanide inhibits cytochrome c oxidase, blocking electron flow, reducing proton pumping, decreasing ATP synthesis, and increasing intermembrane pH.

Key Terms & Definitions

  • Oxidative Phosphorylation — ATP formation using energy from electron transfer and chemiosmosis.
  • Electron Transport Chain (ETC) — Series of protein complexes transferring electrons and pumping protons to form a gradient.
  • Chemiosmosis — Movement of protons across a membrane that drives ATP synthesis.
  • ATP Synthase — Enzyme that produces ATP using the proton gradient.
  • Prosthetic Group — Non-protein molecule required for a protein's activity.
  • Ubiquinone (Q) — Mobile electron carrier in the ETC.
  • Cytochrome c — Protein transferring electrons between complexes in the ETC.

Action Items / Next Steps

  • Review diagrams of the electron transport chain and ATP synthase.
  • Answer review and critical thinking questions at the end of the section.
  • Read about inhibitors such as DNP and cyanide for deeper understanding of ETC regulation.