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Understanding HIV and Retroviral Replication

Mar 29, 2025

Lecture Notes: Retroviruses and HIV Replication

Introduction to Retroviruses

  • Retroviruses are a special case of viral replication, distinct from lytic and lysogenic cycles.
  • Example discussed: HIV

Characteristics of Retroviruses

  • Enveloped, single-stranded RNA virus.
  • Carries three special proteins inside the envelope:
    • Reverse Transcriptase
    • Integrase
    • Protease (discussed later)

Entry and Uncoating

  • Entry Method: Direct fusion with the host cell membrane.
  • Uncoating: Nucleocapsid dissolves, releasing RNA and proteins into the host cell.

Reverse Transcription

  • Reverse Transcriptase: Converts viral RNA to complementary DNA (cDNA).
    • Reads RNA from 5’ to 3’ end.
    • First cDNA strand is created, followed by a second complementary strand.
    • Forms a double-stranded DNA from cDNA.

Integration into Host DNA

  • Integrase: Clips 3’ ends of cDNA, forming sticky ends.
  • Viral RNA is degraded by ribonuclease.
  • Integrase integrates viral DNA into host DNA.
    • Travels through nuclear membrane to the genome.
    • Enters provirus stage (similar to lysogenic cycle).

Active Transcription

  • Unlike typical lysogenic viruses, no repressor gene present.
  • Viral DNA is actively transcribed with host DNA.
  • Viral mRNA is produced and transported to the cytosol.

Protein Translation and Virus Assembly

  • Viral mRNA is translated into proteins:
    • Capsid proteins
    • Reverse transcriptase, integrase, and protease
  • Components self-assemble into immature viruses in the cytosol.

Budding and Maturation

  • Immature viruses bud off from the host cell, acquiring an envelope.
  • Protease: Cleaves proteins, making them functional before the virus infects new cells.

Complexity of Retroviral Replication

  • Combines elements of both lysogenic and lytic cycles.
  • More complex than traditional viral replication processes.

Summary

  • Retroviruses like HIV have a unique replication process that involves reverse transcription, integration into host DNA, and maturation through protease activity.
  • Understanding this process highlights the complexity and adaptability of retroviruses.