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Chapter 3 (week 2) - Globular Protein

Jul 22, 2025

Overview

This lecture reviews Chapter 3 of Lippincott's Biochemistry, focusing on the structure, function, and clinical significance of globular proteins, especially heme proteins such as myoglobin and hemoglobin.


Heme Proteins

  • Heme proteins are a type of globular protein that contain a heme group (an Fe²⁺ ion complexed with protoporphyrin IX).
  • The iron (Fe²⁺) in the heme group forms six bonds:
    • Four with nitrogen atoms in the porphyrin ring.
    • One with a histidine residue (an amino acid in the protein).
    • One available for binding oxygen (O₂) or other ligands.
  • The role of the heme group varies depending on the protein and its environment.

Myoglobin

  • Myoglobin is a simple, single-chain (monomeric) globular protein found in heart and skeletal muscle.
  • Functions mainly as an oxygen reservoir and, to a lesser extent, as an oxygen carrier.
  • Structure:
    • Composed of a single polypeptide with alpha-helical content.
    • Contains a hydrophobic crevice lined with nonpolar amino acids, which holds the heme group in place.
    • The outer surface is lined with polar amino acids, making myoglobin soluble in water.
  • Oxygen affinity:
    • Myoglobin has a very high affinity for oxygen.
    • It becomes saturated at low partial pressures of oxygen and only releases oxygen when levels are extremely low.
    • This makes it ideal for oxygen storage rather than transport.

Hemoglobin Structure & Function

  • Hemoglobin is a more complex globular protein found in red blood cells.
  • Structure:
    • Tetramer: composed of four polypeptide chains (2 alpha and 2 beta chains).
    • Arranged as two identical dimers (αβ₁ and αβ₂).
    • Each subunit contains a heme group, so each hemoglobin molecule can bind up to four oxygen molecules.
  • Functional states:
    • T (taut) state: deoxygenated form, low affinity for oxygen.
    • R (relaxed) state: oxygenated form, high affinity for oxygen.
    • Hemoglobin shifts between these states depending on oxygen binding.
  • Additional functions:
    • Hemoglobin can also transport hydrogen ions (H⁺) and carbon dioxide (CO₂).

Oxygen Dissociation Curves

  • Myoglobin:
    • Exhibits a hyperbolic oxygen dissociation curve.
    • Becomes saturated with oxygen at low partial pressures and releases oxygen only at very low levels.
  • Hemoglobin:
    • Shows a sigmoidal (S-shaped) oxygen dissociation curve.
    • This shape reflects cooperative binding: as each oxygen molecule binds, hemoglobin’s affinity for oxygen increases.
    • At high partial pressures (e.g., in the lungs), hemoglobin binds oxygen tightly; at lower pressures (e.g., in tissues), it releases oxygen more readily.
  • Key point: The sigmoidal curve allows hemoglobin to efficiently pick up oxygen in the lungs and release it in tissues.

Allosteric Effectors & the Bohr Effect

  • Allosteric effectors influence hemoglobin’s oxygen affinity:
    • Hydrogen ions (H⁺): Increased acidity (lower pH) decreases O₂ affinity.
    • Carbon dioxide (CO₂): Increased CO₂ decreases O₂ affinity.
    • 2,3-Bisphosphoglycerate (2,3-BPG): A byproduct of glycolysis in red blood cells; stabilizes the T state, lowering O₂ affinity.
  • Bohr effect:
    • Describes how increased H⁺ and CO₂ shift the oxygen dissociation curve to the right (decreased O₂ affinity), promoting oxygen release in metabolically active tissues.
  • 2,3-BPG:
    • Levels increase in conditions like hypoxia or anemia, enhancing oxygen release.
    • Stored blood loses 2,3-BPG over time, causing transfused red blood cells to hold onto oxygen more tightly; this can be corrected with a rejuvenation solution.
  • CO₂ transport:
    • Most CO₂ is carried as bicarbonate (HCO₃⁻) and H⁺ in the blood.
    • Some CO₂ binds directly to hemoglobin as carbaminohemoglobin, further stabilizing the T state and promoting O₂ release.

Special Conditions & Minor Hemoglobins

  • Carbon monoxide (CO) poisoning:
    • CO binds to heme with much higher affinity than O₂, occupying binding sites and reducing O₂ carrying capacity.
    • CO binding also increases the affinity of remaining sites for O₂, making it harder for hemoglobin to release oxygen to tissues.
  • Types of hemoglobin:
    • Hemoglobin A (HbA, α₂β₂): Main adult form (~90%).
    • Hemoglobin A₂ (HbA₂, α₂δ₂): Minor adult form.
    • Hemoglobin F (HbF, α₂γ₂): Fetal hemoglobin; higher O₂ affinity than adult hemoglobin, allowing the fetus to extract O₂ from maternal blood. HbF is replaced by HbA after birth.
    • Hemoglobin A1c (HbA1c): Glycated form of HbA; levels increase in chronic high blood sugar (e.g., diabetes).

Hemoglobin Genetics & Disorders

  • Genetics:
    • Alpha globin genes: Located on chromosome 16; two genes per chromosome (total of four).
    • Beta globin gene: Located on chromosome 11; one gene per chromosome (total of two).
    • Genes are transcribed to mRNA, spliced to remove introns, and translated into polypeptides.
  • Sickle cell anemia (HbS):
    • Caused by a single nucleotide substitution in the β-globin gene (Glu → Val).
    • Results in hemoglobin that forms sickle-shaped red blood cells.
    • Symptoms: pain, anemia, increased risk of infection, and reduced red blood cell lifespan (<20 days).
    • Heterozygotes (carriers) are protected against malaria; homozygotes have full disease.
  • Hemoglobin C disease:
    • Caused by Glu → Lys substitution in β-globin.
    • Usually results in mild, chronic hemolytic anemia; no severe crises.
  • Hemoglobin SC disease:
    • One sickle cell gene and one hemoglobin C gene; variable clinical severity, less frequent crises than sickle cell anemia.
  • Methemoglobinemia:
    • Fe²⁺ in heme is oxidized to Fe³⁺ (ferric state), which cannot bind oxygen.
    • Causes cyanosis (brownish blood); can be congenital or drug-induced.
    • Treatment: methylene blue (converts Fe³⁺ back to Fe²⁺).
  • Thalassemias:
    • Beta thalassemia: Reduced β-globin production; increased α-globin, more HbA₂ (α₂δ₂) and HbF (α₂γ₂) produced. Symptoms appear after birth; regular transfusions may be needed.
    • Alpha thalassemia: Reduced α-globin production; more severe because α-chains are needed for all hemoglobins. Severity depends on how many of the four α-globin genes are affected:
      • 1 gene: silent carrier
      • 2 genes: trait carrier
      • 3 genes: variable severity
      • 4 genes: fatal (no functional hemoglobin)

Key Terms & Definitions

  • Heme: Iron-containing prosthetic group in myoglobin and hemoglobin.
  • Myoglobin: Muscle oxygen storage protein; single polypeptide chain.
  • Hemoglobin: Blood oxygen transport protein; tetramer (α₂β₂).
  • T state (taut): Deoxyhemoglobin; low oxygen affinity.
  • R state (relaxed): Oxyhemoglobin; high oxygen affinity.
  • 2,3-BPG: Glycolysis byproduct that decreases hemoglobin’s oxygen affinity.
  • Bohr effect: Decreased oxygen affinity due to increased CO₂ and H⁺.
  • Methemoglobinemia: Oxidation of Fe²⁺ to Fe³⁺ in heme, preventing oxygen binding.
  • Thalassemia: Inherited defect in hemoglobin chain synthesis.

Action Items / Next Steps

  • Review and memorize: Oxygen dissociation curves for myoglobin and hemoglobin.
  • Understand: Effects of 2,3-BPG, CO₂, and pH on hemoglobin’s oxygen affinity.
  • Study: Hemoglobin genetic disorders (sickle cell, thalassemias, etc.) and their clinical consequences.
  • Practice: Answering chapter review questions to reinforce understanding.
  • Highlight: Key differences between myoglobin and hemoglobin, and the clinical significance of their properties.