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Foundations of Biological Chemistry
Sep 1, 2024
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Chemistry Review Lecture
Introduction
Understanding chemistry is essential for grasping how molecules interact in living beings.
Metabolism and biochemistry involve numerous chemical reactions within cells.
Focus on sodium chloride (table salt) as an example.
Composed of sodium (a toxic metal) and chlorine (a poisonous gas).
Forms an ionic compound, sodium chloride, which is safe to consume.
Chemical Bonds
Chemical bonds form molecules when atoms interact, either by sharing or transferring electrons.
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Types of Bonds:
Covalent Bonds:
Formed by sharing a pair of valence electrons.
Example: Two hydrogen atoms share electrons to form H2 (a single bond).
Double bonds involve sharing two pairs of electrons (e.g., oxygen molecules, O2).
Hydrogen Bonds:
Occur in polar molecules like water due to electronegativity differences.
Oxygen in H2O is more electronegative than hydrogen, leading to a polar molecule with partial charges.
Result in hydrogen bonds between water molecules.
Ionic Bonds:
Occur between oppositely charged ions (e.g., sodium chloride).
Sodium (positive) and chlorine (negative) form a stable ionic compound.***
Organic and Inorganic Compounds
Organic Compounds:
Carbon-based molecules such as carbohydrates, fats, proteins, and nucleic acids.
Inorganic Compounds:
Include water, salts, and certain acids/bases.
Water is crucial as it makes up 60-80% of cells and maintains homeostasis.
Properties of Water
High Heat Capacity and Vaporization:
Requires substantial energy to change temperature or vaporize.
Aids in homeostasis by resisting temperature changes.
Hydrophilic vs. Hydrophobic:
Hydrophilic substances (e.g., salts) dissolve easily in water.
Hydrophobic substances (e.g., oils) do not dissolve, leading to separation.
Cohesion:
Water molecules stick together, aiding processes like plant water uptake.
High surface tension supports objects like water striders.
Density of Ice:
Ice is less dense than water due to a specific crystal lattice, allowing it to float, which is ecologically important.
Carbon-Based Life
Carbon's ability to form four stable bonds makes it versatile, leading to diverse compounds.
Functional Groups:
Different properties arise from various attachments to carbon skeletons (e.g., amino and carboxy groups).
Macromolecules
Types: Proteins, Carbohydrates, Lipids, Nucleic Acids
Polymers and Monomers:
Polymers are chains of repeating monomers.
Example: Proteins are polypeptides formed from amino acid monomers.
Polymerization and Hydrolysis:
Polymerization involves condensation reactions (water released when forming bonds).
Hydrolysis involves breaking bonds with water.
Conclusion
This lecture provides foundational knowledge important for understanding biological chemistry.
Upcoming lectures will delve deeper into carbohydrates and other macromolecules.
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