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Virus Overview and Classification

Jul 19, 2025

Overview

This lecture covers the discovery, evolution, morphology, and classification systems of viruses, emphasizing their diversity and the Baltimore classification scheme.

Discovery and Detection of Viruses

  • Viruses were discovered using filters that removed bacteria, revealing filterable infectious agents.
  • Most viruses are 20-250 nanometers; some, like amoebae viruses, can be up to 1000 nm.
  • Electron microscopes, not light microscopes, are needed to visualize most viruses.
  • Virions (single virus particles) have been studied using scanning and transmission electron microscopy.

Evolution of Viruses

  • Virus origins are uncertain due to lack of fossils; information comes from genetic and biochemical studies.
  • Three main hypotheses: regressive (from free-living cells), progressive (from mobile genetic elements), and virus-first (pre-cellular origins).
  • Viruses likely have multiple evolutionary origins and continue evolving with their hosts.

Viral Structure and Morphology

  • Virions lack cellular structures and consist of nucleic acid core, protein capsid, and sometimes an envelope.
  • Capsomeres are protein subunits forming the capsid.
  • Four main capsid types: helical, icosahedral, enveloped, and head-and-tail.
  • Glycoproteins on the virus surface enable cell attachment via host cell receptors.
  • Example structures: T4 bacteriophage (complex), adenovirus (spiked capsomeres), influenza virus (enveloped with glycoproteins).

Types of Viral Nucleic Acid

  • Viral genomes can be DNA or RNA, single- or double-stranded, linear or circular, and segmented or non-segmented.
  • RNA viruses mutate faster than DNA viruses due to error-prone RNA polymerases.
  • Examples: DNA viruses (chickenpox, herpes), RNA viruses (influenza, HIV).

Virus Classification Methods

  • Viruses were initially classified by structure, nucleic acid type, and envelope presence.
  • No universal genomic sequence exists to classify viruses like cellular organisms.
  • Past systems used genome and capsid structure for grouping.

Baltimore Classification System

  • Groups viruses based on their genome and how they produce mRNA:
    • I: dsDNA (e.g., Herpes simplex)
    • II: ssDNA (e.g., Canine parvovirus)
    • III: dsRNA (e.g., Rotavirus)
    • IV: ssRNA (+) (e.g., Picornavirus)
    • V: ssRNA (-) (e.g., Rabies virus)
    • VI: ssRNA with reverse transcriptase (e.g., HIV)
    • VII: dsDNA with reverse transcriptase (e.g., Hepatitis B)

Key Terms & Definitions

  • Virion — a single virus particle.
  • Capsid — protein shell enclosing a virus’s nucleic acid.
  • Capsomere — subunit of a capsid.
  • Glycoprotein — viral surface molecule for host cell attachment.
  • Enveloped virus — virus surrounded by a lipid membrane from the host cell.
  • Baltimore classification — system grouping viruses by genome type and mRNA synthesis route.

Action Items / Next Steps

  • Review virus morphology diagrams and the Baltimore classification table.
  • Study key examples of each viral group and their replication strategies.
  • Prepare for quiz on viral structures and classification systems.