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Understanding Phylogenetic Trees and Evolution

Jan 29, 2025

Phylogenetic Trees and Relatedness of Species

Introduction to Relatedness in Evolution

  • Key Question: How are different species related to each other?
  • Evolutionary Context: Relatedness is tied to how recently two species share a common ancestor.
  • Objective: Construct a phylogenetic tree to show how different species evolved from common ancestors using observable traits.

Phylogenetic Tree

  • Definition: A graphical representation showing the evolutionary relationships among various biological species based on similarities and differences in their physical or genetic characteristics.
  • Simplification: The example uses five species and five traits. In practice, biologists use numerous traits and molecular evidence (DNA/protein differences).
  • Origin of Term:
    • Phylo: Greek for group or kind.
    • Genetic: Related to genesis or origin.

Constructing a Phylogenetic Tree

  1. Outgroup Identification

    • Lamprey is identified as an outgroup because it lacks the observable traits of the other species.
    • Purpose of Outgroup: Provides a reference point for determining the root of the tree.
  2. Branching Point

    • Start with a common ancestor deep in the past.
    • The first divergence is between the lamprey and all other species.
  3. Derived Traits

    • Jaws: Derived trait present in all species except the lamprey.
      • At some point, a species evolved jaws which proved to be favorable.
  4. Further Divergence

    • Sea Bass: Next divergence after jaws; lacks lungs, unlike the remaining species.
    • Lungs: Hypothesized to have evolved in the ancestors of the antelope, bald eagle, and alligator.
  5. Remaining Traits and Species

    • Gizzard: Present in bald eagle and alligator.
    • Feathers: Unique to the bald eagle, evolved after divergence from common ancestor with alligator.
    • Fur: Present in antelope, placement on the tree is less certain without further evidence.

Principle of Parsimony

  • Definition: Preference for the simplest explanation that fits the evidence.
  • Application: Applied to hypothesize the simplest evolutionary path for the traits considered.

Summary

  • Phylogenetic Tree Outcome: Provides a visual hypothesis of species relatedness and common ancestry.
  • Complexity and Evidence: Real phylogenetic studies incorporate genetic evidence to refine hypotheses.
  • Interpreting the Tree:
    • Bald eagle and alligator are more closely related to each other than to the antelope, based on more recent common ancestry.
    • Ongoing research and evidence gathering are necessary for tree refinement.

Future Considerations

  • Further Evidence: Look at genetic data and protein comparisons to support or refine the phylogenetic tree's accuracy.
  • Complex Hypotheses: Additional research may reveal more complex evolutionary explanations.