Understanding Likelihood Ratios in Diagnostics

Oct 22, 2024

Lecture on Likelihood Ratios in Diagnostic Testing

Introduction

  • Presenter: Terry Shainefeld, UAB School of Medicine
  • Topic: Use of likelihood ratios in diagnostic tests and determining post-test probability

Understanding Likelihood Ratios (LR)

  • Definition: Likelihood ratios indicate how many times more or less likely a test result is in diseased individuals compared to non-diseased.
  • Components:
    • Numerator: Probability of test result in diseased individuals
    • Denominator: Probability of test result in non-diseased individuals
  • Incorporates: Sensitivity and specificity into a single number

Types of Likelihood Ratios

  1. Positive Likelihood Ratio (LR+):

    • Used for positive test results
    • Formula: Sensitivity / (1 - Specificity)
    • Higher LR+ increases post-test probability
    • Choose test with largest LR+ to rule in disease
  2. Negative Likelihood Ratio (LR-):

    • Used for negative test results
    • Formula: (1 - Sensitivity) / Specificity
    • Lower LR- reduces post-test probability
    • Choose test with smallest LR- to rule out disease

Applications of Likelihood Ratios

  1. Choosing a Diagnostic Test:

    • Example: Tests for determining infection in children
      • Tests: C-reactive protein, procalcitonin, white blood cell counts
      • Rule In: Choose test with highest LR+ (e.g., procalcitonin)
      • Rule Out: Choose test with lowest LR- (e.g., C-reactive protein)
    • Different tests often have different roles
  2. Determining Post-Test Probability:

    • Tool: Fagan's nomogram
      • Components: Pre-test probability, likelihood ratio, post-test probability
      • Process: Draw a line from pre-test probability through LR to post-test probability
    • EBM Calculators: Use LR to calculate post-test odds, convert odds to probability

Practical Use of Likelihood Ratios

  • Positive LRs: Increase probability
  • Negative LRs: Decrease probability
  • McGee's Estimation:
    • Probability change by 15% with each step in LR
    • LR of 2, 5, 10 increase probability significantly
    • LR of 0.5, 0.2, 0.1 decrease probability significantly
  • Key Takeaway:
    • Choose tests with high LR+ for ruling in disease
    • Choose tests with low LR- for ruling out disease

Conclusion

  • Understanding likelihood ratios helps in better utilizing diagnostic tests.
  • Contact Terry Shainefeld through course website or blog for questions.